Workshops
Hands-on bioinformatics training using Software Carpentries methodology.
In order to access, you will need a valid subscription. Once you have successfully logged in to verify your status, you should have access. If you have any trouble, please reach out
Introduction to R - Visualisation
Create publication-quality plots and figures using ggplot2. Learn to visualise genomic data, expression patterns, and statistical results.
COMING SOON
Introduction to Python for Bioinformatics
Learn Python programming essentials including Pandas, NumPy, and Biopython for genomic data analysis and automation.
COMING SOON
Introduction to Unix/Linux Command Line
Essential command-line skills for bioinformatics pipelines, file management, and high-performance computing environments.
COMING SOON
Version Control with Git
Track analysis scripts, collaborate on pipelines, and ensure reproducible research using Git and GitHub.
COMING SOON
NGS Data Pre-processing
Quality control, trimming, alignment, and variant calling workflows for next-generation sequencing data using command-line tools.
COMING SOON
Whole Genome Sequencing QC
Comprehensive quality assessment using FastQC, MultiQC, contamination screening, and coverage analysis for WGS data.
COMING SOON
RNA-Seq Analysis
Differential expression analysis, pathway enrichment, and visualisation using DESeq2, edgeR, and related tools.
COMING SOON
Variant Calling and Annotation
SNP and indel detection, filtering strategies, and functional annotation using GATK, VEP, and SnpEff.
COMING SOON
High-Performance Computing for Genomics
Using SLURM job schedulers, optimising computational resources, and managing large-scale genomic analyses.
COMING SOON
Statistical Analysis for Genomics
Experimental design, multiple testing correction, power analysis, and statistical methods for genomic data.
COMING SOON
Genome Assembly and Annotation
De novo genome assembly, quality assessment, scaffolding, and gene prediction for newly sequenced genomes.
COMING SOON
Metagenomics Analysis
16S rRNA and shotgun metagenomic sequencing analysis, taxonomic profiling, and diversity assessment.
COMING SOON
Workflow Management (Nextflow/Snakemake)
Build reproducible, scalable bioinformatics pipelines using modern workflow management systems.
COMING SOON
Machine Learning for Genomics
Classification, feature selection, and model validation applied to genomic datasets using scikit-learn and TensorFlow.
COMING SOON
Single-Cell RNA-Seq Analysis
Normalisation, clustering, cell type identification, and trajectory analysis using Seurat and Scanpy.
COMING SOON
Long-Read Sequencing Analysis
PacBio and Oxford Nanopore data processing, structural variant detection, and phasing applications.
COMING SOON
Phylogenetics and Evolution
Phylogenetic tree construction, molecular evolution analysis, and comparative genomics methods.
COMING SOON
Population Genetics and GWAS
Linkage analysis, genome-wide association studies, ancestry analysis, and population structure assessment.
COMING SOON
Genomic Data Visualisation
IGV, UCSC Genome Browser, circos plots, Manhattan plots, and custom visualisation for genomic data.
COMING SOON
Agricultural Genomics
Crop breeding analysis, quantitative trait loci mapping, and genomic selection for plant improvement.
COMING SOON
Veterinary Genomics
Animal health genetics, breed analysis, disease variant detection, and companion animal genomics.
COMING SOON
Conservation Genomics
Population diversity assessment, inbreeding analysis, and demographic history for endangered species.
COMING SOON
Clinical Genomics & Diagnostics
Variant interpretation, ACMG guidelines, clinical reporting standards, and precision medicine applications.
COMING SOON